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The student will work jointly between the labs of Drs. Frank Stewart (Biological Sciences) and Kostas Konstantinidis (Biological Sciences, Civil and Environmental Engineering) to characterize a globally important marine bacterial group (SAR11). A collaboration between these labs recently described how SAR11, the world’s most abundant organismal group, has adapted to the unique chemical and physical environment of anoxic oxygen minimum zones (OMZs). This work (Tsementzi et al.
Native microbial communities (microbiomes) of the vertebrate gut exert vital effects on host ecology, physiology, and evolution. This project explores the potential that the gut microbiome of herbivorous fish plays a vital role in biochemically degrading algal toxins consumed by the host fish, and therefore structuring diet choice and ecology. The student will work jointly between the labs of Drs. Mark Hay and Frank Stewart to test this broad hypothesis, likely focusing on the microbiomes of specific coral reef herbivores.
Single-celled marine algae are especially chemically rich, producing toxins that kill fish, marine mammals, and seabirds, contaminate shellfish, and threaten human health. Many predators of these algae – copepods – selectively consume less toxic algae, which in turn sense copepods via an excreted blend of copepod-specific molecules. These algae then become up to 20X more toxic when they sense copepod cues in the open ocean.
The characterization of sediment biogeochemistry at high spatial and temporal resolution is a necessary step in predicting the overall pathways and extent of hydrocarbon degradation in areas affected during and after an oil spill. However, geochemical data for sediments from deeper environments are scarce, and most studies do not measure the full suite of terminal electron acceptors involved in sediment diagenesis.
Single-celled marine algae are especially chemically rich, producing toxins that kill fish, marine mammals, and seabirds, contaminate shellfish, and threaten human health. Many predators of these algae – copepods – selectively consume less toxic algae, which in turn sense copepods via an excreted blend of copepod-specific molecules. These algae then become up to 20X more toxic when they sense copepod cues in the open ocean.
The characterization of sediment biogeochemistry at high spatial and temporal resolution is a necessary step in predicting the overall pathways and extent of hydrocarbon degradation in areas affected during and after an oil spill. However, geochemical data for sediments from deeper environments are scarce, and most studies do not measure the full suite of terminal electron acceptors involved in sediment diagenesis.
Single-celled marine algae are especially chemically rich, producing toxins that kill fish, marine mammals, and seabirds, contaminate shellfish, and threaten human health. Many predators of these algae – copepods – selectively consume less toxic algae, which in turn sense copepods via an excreted blend of copepod-specific molecules. These algae then become up to 20X more toxic when they sense copepod cues in the open ocean.
Plastic marine debris or the plastisphere impacts marine organisms through ingestion, entanglement, and as a source of toxic chemicals. The plastisphere could also have a major impact on biogeochemical cycles in the oceans. Plastics are transported via major ocean currents to central gyres, where they reside for decadal time scales. The amount of plastic waste is large, exceeding 2 kg/ km2 in central gyres. Even the most recent ocean surveys cannot account for the amount of debris estimated to enter the ocean, with inputs and outputs differing by orders of magnitude.
The effects of climate change on the coastal ocean include a decrease in riverine inputs and increase in salinity in estuaries with impacts on primary production, macrofauna, and sediment biogeochemistry that are poorly understood. One clear effect of the increase in salinity associated with the decrease in riverine discharge, however, is the enhanced coagulation of inorganic material further upriver. Flocculation of particulate material upriver will enhance its flux to the sediment and simultaneously decrease the outflux of particulate material to the continental shelf.
Plastic marine debris or the plastisphere impacts marine organisms through ingestion, entanglement, and as a source of toxic chemicals. The plastisphere could also have a major impact on biogeochemical cycles in the oceans. Plastics are transported via major ocean currents to central gyres, where they reside for decadal time scales. The amount of plastic waste is large, exceeding 2 kg/ km2 in central gyres. Even the most recent ocean surveys cannot account for the amount of debris estimated to enter the ocean, with inputs and outputs differing by orders of magnitude.
